An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1186/s13058-021-01445-4

https://doi.org/10.1186/s13058-021-01445-4

Single cell transcriptome atlas of mouse mammary epithelial cells across development

Cited by: 19
Author(s): Bhupinder Pal, Yunshun Chen, Michael J. G. Milevskiy, François Vaillant, Lexie Prokopuk, Caleb A. Dawson, Bianca D. Capaldo, Xiaoyu Song, Felicity C. Jackling, Paul Timpson, Geoffrey J. Lindeman, Gordon K. Smyth, Jane E. Visvader
Published: about 4 years ago

Software Mentions 8

bioconductor: destiny
Creates diffusion maps
Papers that mentioned: 18
Very Likely Science (100)
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
Very Likely Science (100)
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
Very Likely Science (78)
bioconductor: Rsubread
Mapping, quantification and variant analysis of sequencing data
Papers that mentioned: 331
Very Likely Science (100)
cran: pheatmap
Pretty Heatmaps
Papers that mentioned: 2,572
Very Likely Science (75)
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
Very Likely Science (100)
pypi: destiny
Papers that mentioned: 18
Very Likely Science (65)
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203
Very Likely Science (100)