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Papers: 10.1186/s12967-021-02800-x

https://doi.org/10.1186/s12967-021-02800-x

Identification of 4 immune cells and a 5-lncRNA risk signature with prognosis for early-stage lung adenocarcinoma

Cited by: 25
Author(s): Liancai Mu, Ke Ding, Ranran Tu, Wei Yang
Published: over 5 years ago

Software Mentions 12

bioconductor: clusterProfiler
A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223
Very Likely Science (75)
bioconductor: ConsensusClusterPlus
ConsensusClusterPlus
Papers that mentioned: 313
Likely Science (50)
bioconductor: GSVA
Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893
Very Likely Science (100)
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
Very Likely Science (78)
bioconductor: sva
Surrogate Variable Analysis
Papers that mentioned: 511
Very Likely Science (100)
bioconductor: TCGAbiolinks
TCGAbiolinks: An R/Bioconductor package for integrative analysis with GDC data
Papers that mentioned: 276
Very Likely Science (100)
cran: corrplot
Visualization of a Correlation Matrix
Papers that mentioned: 1,077
Very Likely Science (100)
cran: ggstatsplot
'ggplot2' Based Plots with Statistical Details
Papers that mentioned: 82
Very Likely Science (100)
cran: pheatmap
Pretty Heatmaps
Papers that mentioned: 2,572
Very Likely Science (75)
cran: rms
Regression Modeling Strategies
Papers that mentioned: 1,236
Very Likely Science (100)
cran: vioplot
Violin Plot
Papers that mentioned: 133
Very Likely Science (100)
pypi: GSVA
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893
Very Likely Science (100)