Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12935-021-02041-4

https://doi.org/10.1186/s12935-021-02041-4

Cited by: 17
Author(s): Weihang Li, Ziyi Ding, Dong Wang, Chengfei Li, Yikai Pan, Yingjing Zhao, Hongzhe Zhao, Tianxing Lu, Rui Xu, Shilei Zhang, Bin Yuan, Yunlong Zhao, Yanjiang Yin, Yuan Gao, Jing Li, Ming Yan
Published: almost 3 years ago

Software Mentions 11

bioconductor: affy

Methods for Affymetrix Oligonucleotide Arrays
Papers that mentioned: 989

bioconductor: affyPLM

Methods for fitting probe-level models
Papers that mentioned: 162

bioconductor: GSVA

Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893

bioconductor: limma

Linear Models for Microarray Data
Papers that mentioned: 7,776

bioconductor: sva

Surrogate Variable Analysis
Papers that mentioned: 511

bioconductor: TCGAbiolinks

TCGAbiolinks: An R/Bioconductor package for integrative analysis with GDC data
Papers that mentioned: 276

cran: e1071

Misc Functions of the Department of Statistics, Probability Theory Group (Formerly: E1071), TU Wien
Papers that mentioned: 419

cran: pROC

Display and Analyze ROC Curves
Papers that mentioned: 1,740

cran: survminer

Drawing Survival Curves using 'ggplot2'
Papers that mentioned: 1,473

cran: VennDiagram

Generate High-Resolution Venn and Euler Plots
Papers that mentioned: 626

pypi: GSVA

Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893