Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1186/s12885-021-08114-x
https://doi.org/10.1186/s12885-021-08114-x
PTEN loss correlates with T cell exclusion across human cancers
Cited by: 31
Author(s): Ziying Lin, Lixia Huang, Shao Li Li, Jincui Gu, Xiaoxian Cui, Yunyun Zhou
Published: over 3 years ago
Software Mentions 4
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
bioconductor: GSVA
Gene Set Variation Analysis for microarray and RNA-seq dataPapers that mentioned: 893
pypi: GSVA
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.Papers that mentioned: 893