Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12864-021-07845-2

https://doi.org/10.1186/s12864-021-07845-2

ARPEGGIO: Automated Reproducible Polyploid EpiGenetic GuIdance workflOw

Cited by: 4
Author(s): Stefan Milosavljevic, Tony Kuo, Samuele Decarli, Lucas Mohn, Jun Sese, Kentaro Shimizu, Rie Shimizu‐Inatsugi, Mark D. Robinson
Published: over 3 years ago

Software Mentions 4

bioconductor: BiSeq

Processing and analyzing bisulfite sequencing data
Papers that mentioned: 33

bioconductor: dmrseq

Detection and inference of differentially methylated regions from Whole Genome Bisulfite Sequencing
Papers that mentioned: 7

bioconductor: QuasR

Quantify and Annotate Short Reads in R
Papers that mentioned: 30

pypi: shell

A better way to run shell commands in Python.
Papers that mentioned: 207