Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12864-021-07437-0

https://doi.org/10.1186/s12864-021-07437-0

Transcriptomics analysis of Toxoplasma gondii-infected mouse macrophages reveals coding and noncoding signatures in the presence and absence of MyD88

Cited by: 7
Author(s): Kayla L. Menard, Lijing Bu, Eric Denkers
Published: over 3 years ago

Software Mentions 6

bioconductor: EBSeq

An R package for gene and isoform differential expression analysis of RNA-seq data
Papers that mentioned: 261

cran: ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441

cran: pheatmap

Pretty Heatmaps
Papers that mentioned: 2,572

cran: reshape2

Flexibly Reshape Data: A Reboot of the Reshape Package
Papers that mentioned: 421

pypi: environment

This library provides parsing and validation of environment variables.
Papers that mentioned: 569

pypi: Pathway

Pathway is a data processing framework which takes care of streaming data updates for you.
Papers that mentioned: 827