Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12864-020-6764-0

https://doi.org/10.1186/s12864-020-6764-0

Functional insights from the GC-poor genomes of two aphid parasitoids, Aphidius ervi and Lysiphlebus fabarum

Cited by: 15
Author(s): Alice B. Dennis, Gabriel I. Ballesteros, Stéphanie Robin, Lukas Schrader, Jens Bast, Jan Berghöfer, Leo W. Beukeboom, Maya Belghazi, Anthony Bretaudeau, Jan Buellesbach, Elizabeth Cash, Dominique Colinet, Zoé Dumas, Mohammed Errbii, Patrizia Falabella, Jean‐Luc Gatti, Elzemiek Geuverink, Joshua D. Gibson, Corinne Hertaeg, Stefanie Hartmann, Emmanuelle Jacquin‐Joly, Mark Lammers, Blas I. Lavandero, Ina Lindenbaum, Lauriane Massardier-Galatà, Camille Meslin, Nicolas Montagné, Nina Pak, Marylène Poirié, Rosanna Salvia, Chris R. Smith, Denis Tagu, Sophie Tarès, Heiko Vogel, Tanja Schwander, Jean Simon, Christian C. Figueroa, Christoph Vorburger, Fabrice Legeai, Jürgen Gadau
Published: over 4 years ago

Software Mentions 8

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: sscu
Strength of Selected Codon Usage
Papers that mentioned: 1
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: kmer
Fast K-Mer Counting and Clustering for Biological Sequence Analysis
Papers that mentioned: 240
cran: reshape
Flexibly Reshape Data
Papers that mentioned: 123
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: hmmer
HMMER binaries.
Papers that mentioned: 196
pypi: reshape
The missing reshape for Python
Papers that mentioned: 123