Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12864-018-5016-z

https://doi.org/10.1186/s12864-018-5016-z

Nascent RNA sequencing analysis provides insights into enhancer-mediated gene regulation

Cited by: 49
Author(s): Jing Wang, Yue Zhao, Xiaofan Zhou, Scott W. Hiebert, Qi Liu, Yu Shyr
Published: over 6 years ago

Software Mentions 4

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: groHMM
GRO-seq Analysis Pipeline
Papers that mentioned: 6
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing reads
Papers that mentioned: 1,562
pypi: suite
A better dictionary.
Papers that mentioned: 286