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Papers: 10.1186/s12864-017-4380-4

https://doi.org/10.1186/s12864-017-4380-4

Resistant and susceptible chicken lines show distinctive responses to Newcastle disease virus infection in the lung transcriptome

Cited by: 36
Author(s): Melissa S. Deist, Rodrigo A. Gallardo, David Bunn, Jack C. M. Dekkers, Huaijun Zhou, Susan J. Lamont
Published: over 7 years ago

Software Mentions 5

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
Very Likely Science (100)
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
Very Likely Science (100)
bioconductor: pcaExplorer
Interactive Visualization of RNA-seq Data Using a Principal Components Approach
Papers that mentioned: 26
Very Likely Science (100)
cran: WGCNA
Weighted Correlation Network Analysis
Papers that mentioned: 3,479
Very Likely Science (85)
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071
Very Likely Science (65)