Papers: 10.1186/s12864-016-3288-8

https://doi.org/10.1186/s12864-016-3288-8

The ChIP-Seq tools and web server: a resource for analyzing ChIP-seq and other types of genomic data

Cited by: 24
Author(s): Giovanna Ambrosini, René Dreos, Sunil Kumar, Philipp Bücher
Published: almost 10 years ago

Software Mentions 5

bioconductor: ArrayExpress
Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet
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bioconductor: metagene
A package to produce metagene plots
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cran: JASPAR
R modules for JASPAR databases: a collection of transcription factor DNA-binding preferences, modeled as matrices
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pypi: MACS
Model Based Analysis for ChIP-Seq data
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pypi: stats
Calculator-style statistical functions
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