Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12864-015-1624-z

https://doi.org/10.1186/s12864-015-1624-z

Distinctive expansion of gene families associated with plant cell wall degradation, secondary metabolism, and nutrient uptake in the genomes of grapevine trunk pathogens

Cited by: 132
Author(s): Abraham Morales‐Cruz, Katherine C. H. Amrine, Bárbara Blanco-Ulate, Daniel P. Lawrence, Renaud Travadon, Philippe E. Rolshausen, Kendra Baumgartner, Dario Cantu
Published: over 9 years ago

Software Mentions 4

bioconductor: CAFE
Chromosmal Aberrations Finder in Expression data
Papers that mentioned: 251
pypi: perl
Perl as a Python package
Papers that mentioned: 604
pypi: scythe
Find best matching set of transcripts for one-to-one orthologous genes from two or more species
Papers that mentioned: 15
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017