Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1186/s12859-021-04210-8
https://doi.org/10.1186/s12859-021-04210-8
Contrastive self-supervised clustering of scRNA-seq data
Cited by: 28
Author(s): Madalina Ciortan, Matthieu Defrance
Published: over 3 years ago
Software Mentions 13
bioconductor: SIMLR
Single-cell Interpretation via Multi-kernel LeaRning (SIMLR)Papers that mentioned: 40
cran: RaceID
Identification of Cell Types, Inference of Lineage Trees, and Prediction of Noise Dynamics from Single-Cell RNA-Seq DataPapers that mentioned: 25
cran: SOUP
Stochastic Ordering Using Permutations (and Pairwise Comparisons)Papers that mentioned: 6
pypi: contrastive
Python library for performing unsupervised learning (e.g. PCA) in contrastive settings, where one is interested in finding directions and patterns that exist one dataset, but not the otherPapers that mentioned: 1
pypi: scikit-learn
A set of python modules for machine learning and data miningPapers that mentioned: 2,431
pypi: SIMLR
Visualization and analysis of single-cell RNA-seq data by kernel-based similarity learningPapers that mentioned: 40