Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12859-021-03981-4

https://doi.org/10.1186/s12859-021-03981-4

cognac: rapid generation of concatenated gene alignments for phylogenetic inference from large, bacterial whole genome sequencing datasets

Cited by: 10
Author(s): Ryan Crawford, Evan S. Snitkin
Published: almost 4 years ago

Software Mentions 5

cran: fasta
Fast Adaptive Shrinkage/Thresholding Algorithm
Papers that mentioned: 848
cran: Rcpp
Seamless R and C++ Integration
Papers that mentioned: 152
cran: RcppParallel
Parallel Programming Tools for 'Rcpp'
Papers that mentioned: 6
pypi: apply
An apply function for Python 2 and 3
Papers that mentioned: 2
pypi: fasta
The fasta python package enables you to deal with biological sequence files easily.
Papers that mentioned: 848