Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1186/s12859-021-03967-2
https://doi.org/10.1186/s12859-021-03967-2
tidyMicro: a pipeline for microbiome data analysis and visualization using the tidyverse in R
Cited by: 7
Author(s): Charlie M. Carpenter, Daniel N. Frank, Kayla Williamson, Jaron Arbet, Brandie D. Wagner, Katerina Kechris, Miranda Kroehl
Published: almost 4 years ago
Software Mentions 10
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census dataPapers that mentioned: 1,702
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of GraphicsPapers that mentioned: 11,441
cran: ggrepel
Automatically Position Non-Overlapping Text Labels with 'ggplot2'Papers that mentioned: 164
cran: MASS
Support Functions and Datasets for Venables and Ripley's MASSPapers that mentioned: 2,353
cran: PERMANOVA
Multivariate Analysis of Variance Based on Distances and PermutationsPapers that mentioned: 6,292