Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12859-020-03641-z

https://doi.org/10.1186/s12859-020-03641-z

A rank-based marker selection method for high throughput scRNA-seq data

Cited by: 23
Author(s): Alexander Vargo, Anna C. Gilbert
Published: about 4 years ago

Software Mentions 8

bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: MAST
Model-based Analysis of Single Cell Transcriptomics
Papers that mentioned: 668
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
pypi: MAST
MAterials Simulation Toolkit
Papers that mentioned: 668
pypi: rpy2
Python interface to the R language (embedded R)
Papers that mentioned: 40
pypi: scanpy
Single-Cell Analysis in Python.
Papers that mentioned: 68
pypi: scGeneFit
Genetic marker selection with linear programming
Papers that mentioned: 1
pypi: scikit-learn
A set of python modules for machine learning and data mining
Papers that mentioned: 2,431