Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12859-019-3100-2

https://doi.org/10.1186/s12859-019-3100-2

RACS: rapid analysis of ChIP-Seq data for contig based genomes

Cited by: 4
Author(s): Marcelo Ponce, Alejandro Saettone, Syed Nabeel‐Shah, Jeffrey Fillingham
Published: about 5 years ago

Software Mentions 5

bioconductor: metagene
A package to produce metagene plots
Papers that mentioned: 9
pypi: deepTools
Useful tools for exploring deep sequencing data.
Papers that mentioned: 435
pypi: MACS
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,233
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203
pypi: shell
A better way to run shell commands in Python.
Papers that mentioned: 207