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Papers: 10.1186/s12859-018-2140-3

https://doi.org/10.1186/s12859-018-2140-3

iSeg: an efficient algorithm for segmentation of genomic and epigenomic data

Cited by: 9
Author(s): Senthil Balaji Girimurugan, Yuhang Liu, Pei-Yau Lung, Daniel Vera, Jane A Dennis, Hank W. Bass, Jinfeng Zhang
Published: over 7 years ago

Software Mentions 7

bioconductor: DNAcopy
DNA Copy Number Data Analysis
Papers that mentioned: 154
Very Likely Science (100)
bioconductor: fastseg
fastseg - a fast segmentation algorithm
Papers that mentioned: 1
Very Likely Science (85)
bioconductor: mBPCR
Bayesian Piecewise Constant Regression for DNA copy number estimation
Papers that mentioned: 4
Very Likely Science (100)
bioconductor: snapCGH
Segmentation, normalisation and processing of aCGH data
Papers that mentioned: 16
Very Likely Science (98)
pypi: fastseg
Fast Semantic Segmentation for PyTorch
Papers that mentioned: 1
Very Likely Science (80)
pypi: MACS
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,233
Very Likely Science (75)
pypi: PePr
Peak-calling and Prioritization pipeline for replicated ChIP-Seq data
Papers that mentioned: 18
Very Likely Science (100)