Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12859-018-2074-9

https://doi.org/10.1186/s12859-018-2074-9

BpWrapper: BioPerl-based sequence and tree utilities for rapid prototyping of bioinformatics pipelines

Cited by: 11
Author(s): Yözen Hernández, Rocky Bernstein, Pedro Pagan, Levy C. Vargas, William D. McCaig, Girish Ramrattan, Saymon Akther, Amanda M. Larracuente, Lia Di, Filipe Garrett Vieira, Wang Qiu
Published: over 6 years ago

Software Mentions 7

cran: bioseq
A Toolbox for Manipulating Biological Sequences
Papers that mentioned: 1
cran: fasta
Fast Adaptive Shrinkage/Thresholding Algorithm
Papers that mentioned: 848
pypi: bioseq
Bioseq is a lightweight Python package for handling nucleotide, protein, and codon sequences.
Papers that mentioned: 1
pypi: FAST
FAST: Framework for Agile Software Testing
Papers that mentioned: 651
pypi: fasta
The fasta python package enables you to deal with biological sequence files easily.
Papers that mentioned: 848
pypi: nt
Papers that mentioned: 4
pypi: Tree
A package for creating and drawing trees
Papers that mentioned: 286