Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12859-016-1441-7

https://doi.org/10.1186/s12859-016-1441-7

Negative binomial mixed models for analyzing microbiome count data

Cited by: 114
Author(s): Xinyan Zhang, Himel Mallick, Zaixiang Tang, Lei Zhang, Xiangqin Cui, Andrew K. Benson, Nengjun Yi
Published: almost 8 years ago

Software Mentions 3

cran: nlme
Linear and Nonlinear Mixed Effects Models
Papers that mentioned: 3,265
pypi: lme
Cotação London Metal Exchange
Papers that mentioned: 228
pypi: MetaPhlAn
MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.
Papers that mentioned: 306