Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/1471-2164-16-S7-S13

https://doi.org/10.1186/1471-2164-16-S7-S13

MOST+: A de novo motif finding approach combining genomic sequence and heterogeneous genome-wide signatures

Cited by: 6
Author(s): Yizhe Zhang, Yiping He, Guangyong Zheng, Chaochun Wei
Published: over 9 years ago

Software Mentions 4

cran: JASPAR

R modules for JASPAR databases: a collection of transcription factor DNA-binding preferences, modeled as matrices
Papers that mentioned: 1,283

cran: MOST

Multiphase Optimization Strategy
Papers that mentioned: 160

pypi: MACS

Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,233

pypi: STEME

STEME: an accurate efficient motif finder for large data sets.
Papers that mentioned: 16