Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/1471-2164-15-676

https://doi.org/10.1186/1471-2164-15-676

De novo transcriptome sequencing and digital gene expression analysis predict biosynthetic pathway of rhynchophylline and isorhynchophylline from Uncaria rhynchophylla, a non-model plant with potent anti-alzheimer’s properties

Cited by: 58
Author(s): Qianqian Guo, Xiaojun Ma, Shugen Wei, Deyou Qiu, Iain W. Wilson, Ping Wu, Qi Tang, Lijun Liu, Shoukun Dong, Zimin Wei
Published: over 10 years ago

Software Mentions 4

bioconductor: DEGseq
Identify Differentially Expressed Genes from RNA-seq data
Papers that mentioned: 697
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071
pypi: trinity
The Trinity client for the Ethereum network
Papers that mentioned: 51