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Papers: 10.1186/1471-2105-8-221

https://doi.org/10.1186/1471-2105-8-221

Ringo – an R/Bioconductor package for analyzing ChIP-chip readouts

Cited by: 156
Author(s): Joern Toedling, Oleg Sklyar, Wolfgang Huber
Published: about 18 years ago

Software Mentions 9

bioconductor: ACME
Algorithms for Calculating Microarray Enrichment (ACME)
Papers that mentioned: 63
Very Likely Science (100)
bioconductor: affy
Methods for Affymetrix Oligonucleotide Arrays
Papers that mentioned: 989
Very Likely Science (98)
bioconductor: Biobase
Biobase: Base functions for Bioconductor
Papers that mentioned: 104
Very Likely Science (75)
bioconductor: geneplotter
Graphics related functions for Bioconductor
Papers that mentioned: 14
Very Likely Science (100)
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
Very Likely Science (78)
bioconductor: Ringo
R Investigation of ChIP-chip Oligoarrays
Papers that mentioned: 36
Very Likely Science (90)
bioconductor: vsn
Variance stabilization and calibration for microarray data
Papers that mentioned: 91
Very Likely Science (100)
cran: MAT
Multidimensional Adaptive Testing
Papers that mentioned: 216
Very Likely Science (83)
cran: RColorBrewer
ColorBrewer Palettes
Papers that mentioned: 490
Very Likely Science (83)