Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/1471-2105-15-224

https://doi.org/10.1186/1471-2105-15-224

Cited by: 275
Author(s): Krishna R. Kalari, Asha Nair, Jaysheel Bhavsar, Daniel R. O’Brien, Jaime Davila, Matthew A. Bockol, Jinfu Nie, Xiaojia Tang, Saurabh Baheti, Jay B. Doughty, Sumit Middha, Hugues Sicotte, E. Aubrey Thompson, Yan W. Asmann, Jean-Pierre A. Kocher
Published: almost 10 years ago

Software Mentions 8

bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
cran: MAP
Multimodal Automated Phenotyping
Papers that mentioned: 215
pypi: Circos
Circos plots in Python!
Papers that mentioned: 2,252
pypi: Cython
The Cython compiler for writing C extensions in the Python language.
Papers that mentioned: 118
pypi: g
cli command to easily sync current directory
Papers that mentioned: 130
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071
pypi: RSeQC
RNA-seq QC Package
Papers that mentioned: 366
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017