Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/1471-2105-13-136

https://doi.org/10.1186/1471-2105-13-136

Down-weighting overlapping genes improves gene set analysis

Cited by: 120
Author(s): Adi L. Tarca, Sorin Drăghici, Gaurav Bhatti, Roberto Romero
Published: over 12 years ago

Software Mentions 9

bioconductor: affy
Methods for Affymetrix Oligonucleotide Arrays
Papers that mentioned: 989
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: PADOG
Pathway Analysis with Down-weighting of Overlapping Genes (PADOG)
Papers that mentioned: 19
cran: GSA
Gene Set Analysis
Papers that mentioned: 285
cran: SAM
Sparse Additive Modelling
Papers that mentioned: 4,566
pypi: db
Databases for Humans
Papers that mentioned: 108
pypi: environment
This library provides parsing and validation of environment variables.
Papers that mentioned: 569
pypi: GSA
Python Package to implement Gravitational Search Algorithm. Documentation at:https://github.com/deepanshu1999/GSA
Papers that mentioned: 285
pypi: language
Basic tools for working with natural language text data
Papers that mentioned: 427