Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1155/2021/6613151

https://doi.org/10.1155/2021/6613151

Genomic and Transcriptome Analysis to Identify the Role of the mTOR Pathway in Kidney Renal Clear Cell Carcinoma and Its Potential Therapeutic Significance

Cited by: 6
Author(s): Xiangyu Che, Xiaochen Qi, Yingkun Xu, Qifei Wang, Guangzhen Wu
Published: over 3 years ago

Software Mentions 19

bioconductor: GEOquery

Get data from NCBI Gene Expression Omnibus (GEO)
Papers that mentioned: 328

cran: circlize

Circular Visualization
Papers that mentioned: 260

cran: corrplot

Visualization of a Correlation Matrix
Papers that mentioned: 1,077

cran: dplyr

A Grammar of Data Manipulation
Papers that mentioned: 1,213

cran: ggalluvial

Alluvial Plots in 'ggplot2'
Papers that mentioned: 57

cran: ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441

cran: ggstatsplot

'ggplot2' Based Plots with Statistical Details
Papers that mentioned: 82

cran: glmnet

Lasso and Elastic-Net Regularized Generalized Linear Models
Papers that mentioned: 1,607

cran: gplots

Various R Programming Tools for Plotting Data
Papers that mentioned: 2,122

cran: pheatmap

Pretty Heatmaps
Papers that mentioned: 2,572

cran: plyr

Tools for Splitting, Applying and Combining Data
Papers that mentioned: 468

cran: rms

Regression Modeling Strategies
Papers that mentioned: 1,236

cran: survminer

Drawing Survival Curves using 'ggplot2'
Papers that mentioned: 1,473

cran: tidyr

Tidy Messy Data
Papers that mentioned: 321

cran: tidyverse

Easily Install and Load the 'Tidyverse'
Papers that mentioned: 1,023

cran: xlsx

Read, Write, Format Excel 2007 and Excel 97/2000/XP/2003 Files
Papers that mentioned: 95

pypi: glmnet

Python wrapper for glmnet
Papers that mentioned: 1,607

pypi: plyr

UNKNOWN
Papers that mentioned: 468

pypi: xlsx

XLSX Parsing (from js-xlsx)
Papers that mentioned: 95