Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1155/2021/4743971

https://doi.org/10.1155/2021/4743971

Cited by: 0
Author(s): Ai-lan Li, Yong‐Mei Zhu, Lai-qiang Gao, Shuyue Wei, Mingtao Wang, Qiang Ma, Yuanna Zheng, Jianhua Li, Qingfeng Wang
Published: over 3 years ago

Software Mentions 12

bioconductor: clusterProfiler

A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223

bioconductor: enrichplot

Visualization of Functional Enrichment Result
Papers that mentioned: 249

bioconductor: limma

Linear Models for Microarray Data
Papers that mentioned: 7,776

bioconductor: TCGAbiolinks

TCGAbiolinks: An R/Bioconductor package for integrative analysis with GDC data
Papers that mentioned: 276

cran: cowplot

Streamlined Plot Theme and Plot Annotations for 'ggplot2'
Papers that mentioned: 298

cran: ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441

cran: GOplot

Visualization of Functional Analysis Data
Papers that mentioned: 269

cran: pheatmap

Pretty Heatmaps
Papers that mentioned: 2,572

cran: reshape2

Flexibly Reshape Data: A Reboot of the Reshape Package
Papers that mentioned: 421

cran: scales

Scale Functions for Visualization
Papers that mentioned: 104

cran: timeROC

Time-Dependent ROC Curve and AUC for Censored Survival Data
Papers that mentioned: 254

pypi: scales

Stats for Python processes
Papers that mentioned: 104