Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1128/mSystems.00316-20

https://doi.org/10.1128/mSystems.00316-20

Cited by: 8
Author(s): Rhiannon Mondav, Stefan Bertilsson, Moritz Buck, Silke Langenheder, Eva S. Lindström, Sarahi L. Garcia
Published: over 3 years ago

Software Mentions 11

cran: beanplot

Visualization via Beanplots (Like Boxplot/Stripchart/Violin Plot)
Papers that mentioned: 29

cran: igraph

Network Analysis and Visualization
Papers that mentioned: 1,555

cran: pgirmess

Spatial Analysis and Data Mining for Field Ecologists
Papers that mentioned: 148

cran: usdm

Uncertainty Analysis for Species Distribution Models
Papers that mentioned: 85

cran: vegan

Community Ecology Package
Papers that mentioned: 6,903

pypi: hmmer

HMMER binaries.
Papers that mentioned: 196

pypi: igraph

High performance graph data structures and algorithms
Papers that mentioned: 1,555

pypi: PhyloPhlAn

Precise phylogenetic analysis of microbial isolates and genomes from metagenomes
Papers that mentioned: 144

pypi: picard

The next generation MusicBrainz tagger
Papers that mentioned: 243

pypi: psyche

Papers that mentioned: 1

pypi: stats

Calculator-style statistical functions
Papers that mentioned: 3,105