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Papers: 10.1128/mSystems.00063-20

https://doi.org/10.1128/mSystems.00063-20

Genomic Analysis of Bovine Staphylococcus aureus Isolates from Milk To Elucidate Diversity and Determine the Distributions of Antimicrobial and Virulence Genes and Their Association with Mastitis

Cited by: 31
Author(s): Sohail Naushad, Diego Nobrega, Syed Ali Raza Naqvi, Herman W. Barkema, Jeroen De Buck
Published: almost 5 years ago

Software Mentions 7

cran: dplyr
A Grammar of Data Manipulation
Papers that mentioned: 1,213
Very Likely Science (100)
cran: nnet
Feed-Forward Neural Networks and Multinomial Log-Linear Models
Papers that mentioned: 296
Very Likely Science (93)
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing reads
Papers that mentioned: 1,562
Very Likely Science (100)
pypi: engine
Pure python extensible SQL database engine supporting NULL values. Formally SnakeSQL.
Papers that mentioned: 732
Very Likely Science (65)
pypi: ginger
A very lightweight static site generator
Papers that mentioned: 3
Very Likely Science (65)
pypi: PhyloPhlAn
Precise phylogenetic analysis of microbial isolates and genomes from metagenomes
Papers that mentioned: 144
Very Likely Science (100)
pypi: spaTyper
Typing of Staphylococcus aureus protein A from assemblies
Papers that mentioned: 29
Very Likely Science (100)