Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1128/mSphere.00056-20

https://doi.org/10.1128/mSphere.00056-20

Emergence of a Novel Salmonella enterica Serotype Reading Clonal Group Is Linked to Its Expansion in Commercial Turkey Production, Resulting in Unanticipated Human Illness in North America

Cited by: 19
Author(s): Elizabeth A. Miller, Ehud Elnekave, Cristian Flores-Figueroa, Abigail Johnson, Ashley Kearney, Jeannette Muñoz-Aguayo, Kaitlin A. Tagg, Lorelee Tschetter, Bonnie Weber, Céline Nadon, Dave Boxrud, Randall S. Singer, Jason P. Folster, Timothy J. Johnson
Published: over 4 years ago

Software Mentions 7

bioconductor: ggtree
an R package for visualization of tree and annotation data
Papers that mentioned: 474
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: tidytree
A Tidy Tool for Phylogenetic Tree Data Manipulation
Papers that mentioned: 10
cran: TipDatingBeast
Using Tip Dates with Phylogenetic Trees in BEAST
Papers that mentioned: 9
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903
pypi: stats
Calculator-style statistical functions
Papers that mentioned: 3,105
pypi: tidytree
manager directories
Papers that mentioned: 10