Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1128/mBio.01037-19

https://doi.org/10.1128/mBio.01037-19

Reprogramming of Small Noncoding RNA Populations in Peripheral Blood Reveals Host Biomarkers for Latent and Active Mycobacterium tuberculosis Infection

Cited by: 24
Author(s): Leonardo Silva de Araujo, Marcelo Ribeiro-Alves, Thyago Leal-Calvo, Janaina Aparecida Medeiros Leung, Verónica Durán, Mohamed Samir, Steven R. Talbot, Aravind Tallam, Fernanda Carvalho de Queiroz Mello, Robert Geffers, Maria Helena Féres Saad, Frank Peßler
Published: almost 5 years ago

Software Mentions 6

bioconductor: AgiMicroRna
Processing and Differential Expression Analysis of Agilent microRNA chips
Papers that mentioned: 37
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: GEOquery
Get data from NCBI Gene Expression Omnibus (GEO)
Papers that mentioned: 328
bioconductor: miRNAmeConverter
Convert miRNA Names to Different miRBase Versions
Papers that mentioned: 6
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: analysis
Source code analysis of Python programs
Papers that mentioned: 2,036