Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1093/jmcb/mjaa052

https://doi.org/10.1093/jmcb/mjaa052

Imputing single-cell RNA-seq data by considering cell heterogeneity and prior expression of dropouts

Cited by: 18
Author(s): Lihua Zhang, Shihua Zhang
Published: about 4 years ago

Software Mentions 9

bioconductor: SC3
Single-Cell Consensus Clustering
Papers that mentioned: 71
bioconductor: SIMLR
Single-cell Interpretation via Multi-kernel LeaRning (SIMLR)
Papers that mentioned: 40
bioconductor: splatter
Simple Simulation of Single-cell RNA Sequencing Data
Papers that mentioned: 6
cran: DCA
Dynamic Correlation Analysis for High Dimensional Data
Papers that mentioned: 128
cran: SAVER
Single-Cell RNA-Seq Gene Expression Recovery
Papers that mentioned: 40
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
pypi: DCA
Count autoencoder for scRNA-seq denoising
Papers that mentioned: 128
pypi: SIMLR
Visualization and analysis of single-cell RNA-seq data by kernel-based similarity learning
Papers that mentioned: 40
pypi: splatter
Vizualizing multidimensional points in a pleasing and informative way
Papers that mentioned: 6