Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1093/gigascience/gix129

https://doi.org/10.1093/gigascience/gix129

Hybrid-denovo: a de novo OTU-picking pipeline integrating single-end and paired-end 16S sequence tags

Cited by: 15
Author(s): Xianfeng Chen, Stephen Johnson, Patricio Jeraldo, Junwen Wang, Nicholas Chia, Jean Pierre A. Kocher, Jun Chen
Published: almost 7 years ago

Software Mentions 7

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
pypi: biopython
Freely available tools for computational molecular biology.
Papers that mentioned: 114
pypi: bitarray
efficient arrays of booleans -- C extension
Papers that mentioned: 1
pypi: denovo
handy tools and classes for a new python package
Papers that mentioned: 82
pypi: hybrid
hybrid tools set
Papers that mentioned: 20
pypi: numpy
Fundamental package for array computing in Python
Papers that mentioned: 832
pypi: pyqi
pyqi: expose your interface
Papers that mentioned: 2