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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1093/gigascience/giaa064

https://doi.org/10.1093/gigascience/giaa064

Integrative computational epigenomics to build data-driven gene regulation hypotheses

Cited by: 10
Author(s): Tyrone Chen, Sonika Tyagi
Published: about 5 years ago

Software Mentions 6

bioconductor: ArrayExpress
Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet
Papers that mentioned: 1,962
Very Likely Science (83)
bioconductor: ELMER
Inferring Regulatory Element Landscapes and Transcription Factor Networks Using Cancer Methylomes
Papers that mentioned: 19
Very Likely Science (100)
cran: GFA
Group Factor Analysis
Papers that mentioned: 34
Very Likely Science (85)
cran: iCluster
Integrative clustering of multiple genomic data types
Papers that mentioned: 134
Very Likely Science (75)
pypi: conda
OS-agnostic, system-level binary package manager.
Papers that mentioned: 92
Very Likely Science (100)
pypi: singularity
command line tools for visualization and analysis of singularity containers.
Papers that mentioned: 5
Very Likely Science (100)