Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1093/gbe/evz245

https://doi.org/10.1093/gbe/evz245

The Rhododendron Genome and Chromosomal Organization Provide Insight into Shared Whole-Genome Duplications across the Heath Family (Ericaceae)

Cited by: 42
Author(s): Valerie L. Soza, Dale Lindsley, Adam Waalkes, Elizabeth Ramage, Rupali P Patwardhan, Joshua N. Burton, Andrew Adey, Akash Kumar, Ruolan Qiu, Jay Shendure, Benjamin D. Hall
Published: about 5 years ago

Software Mentions 6

cran: MCL
Markov Cluster Algorithm
Papers that mentioned: 563
cran: SiZer
Significant Zero Crossings
Papers that mentioned: 28
pypi: assembly-stats
Calculates both scaffold and contig statistics (N50, L50, etc.) from a scaffold FASTA file.
Papers that mentioned: 9
pypi: Circos
Circos plots in Python!
Papers that mentioned: 2,252
pypi: custom
Custom self carry
Papers that mentioned: 1,363
pypi: grep
String lookup has never been prettier.
Papers that mentioned: 57