Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1093/gbe/evab127

https://doi.org/10.1093/gbe/evab127

Genome-Inferred Correspondence between Phylogeny and Metabolic Traits in the Wild <i>Drosophila</i> Gut Microbiome

Cited by: 4
Author(s): Jeffery S. McMullen, Eduardo Bueno, Frances Blow, Angela E. Douglas
Published: over 3 years ago

Software Mentions 16

bioconductor: ggtree
an R package for visualization of tree and annotation data
Papers that mentioned: 474
cran: adephylo
Exploratory Analyses for the Phylogenetic Comparative Method
Papers that mentioned: 42
cran: ape
Analyses of Phylogenetics and Evolution
Papers that mentioned: 918
cran: betareg
Beta Regression
Papers that mentioned: 106
cran: car
Companion to Applied Regression
Papers that mentioned: 1,651
cran: dendextend
Extending 'dendrogram' Functionality in R
Papers that mentioned: 201
cran: emmeans
Estimated Marginal Means, aka Least-Squares Means
Papers that mentioned: 1,009
cran: lmtest
Testing Linear Regression Models
Papers that mentioned: 208
cran: pegas
Population and Evolutionary Genetics Analysis System
Papers that mentioned: 117
cran: PERMANOVA
Multivariate Analysis of Variance Based on Distances and Permutations
Papers that mentioned: 6,292
cran: phytools
Phylogenetic Tools for Comparative Biology (and Other Things)
Papers that mentioned: 586
cran: pvclust
Hierarchical Clustering with P-Values via Multiscale Bootstrap Resampling
Papers that mentioned: 442
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903
pypi: ape
A Productive Environment - make/rake/ant/fab-like system with support for FOSD
Papers that mentioned: 918
pypi: car
Papers that mentioned: 1,651
pypi: phytools
Useful tools for physicists.
Papers that mentioned: 586