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Papers: 10.1093/g3journal/jkaa055

https://doi.org/10.1093/g3journal/jkaa055

Transcriptome analysis of <i>Caenorhabditis elegans</i> lacking heme peroxidase SKPO-1 reveals an altered response to <i>Enterococcus faecalis</i>

Cited by: 4
Author(s): Yi Liu, Daniel Martínez-Martínez, Clara L. Essmann, Melissa R. Cruz, Filipe Cabreiro, Danielle A. Garsin
Published: almost 6 years ago

Software Mentions 5

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
Very Likely Science (100)
bioconductor: tximport
Import and summarize transcript-level estimates for transcript- and gene-level analysis
Papers that mentioned: 367
Very Likely Science (100)
cran: ashr
Methods for Adaptive Shrinkage, using Empirical Bayes
Papers that mentioned: 12
Very Likely Science (100)
cran: tidyverse
Easily Install and Load the 'Tidyverse'
Papers that mentioned: 1,023
Very Likely Science (100)
cran: VennDiagram
Generate High-Resolution Venn and Euler Plots
Papers that mentioned: 626
Very Likely Science (83)