Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1093/dnares/dsu041

https://doi.org/10.1093/dnares/dsu041

MetaVelvet-SL: an extension of the Velvet assembler to a de novo metagenomic assembler utilizing supervised learning

Cited by: 82
Author(s): FNU Afiahayati, Kengo Sato, Yasubumi Sakakibara
Published: almost 10 years ago

Software Mentions 2

cran: MAP
Multimodal Automated Phenotyping
Papers that mentioned: 215
pypi: MetaPhlAn
MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.
Papers that mentioned: 306