Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1093/bioinformatics/btv276

https://doi.org/10.1093/bioinformatics/btv276

Phylesystem: a git-based data store for community-curated phylogenetic estimates

Cited by: 31
Author(s): Emily Jane McTavish, Cody E. Hinchliff, James F. Allman, Joseph W. Brown, Karen Cranston, Mark T. Holder, Jonathan Rees, Stephen A. Smith
Published: over 9 years ago

Software Mentions 5

pypi: curator
Templateable Image Gallery Generator.
Papers that mentioned: 1
pypi: dryad
A pipeline to construct reference free core-genome or SNP phylogenetic trees for examining prokaryote relatedness in outbreaks.
Papers that mentioned: 20
pypi: indexer
a RDBMS full text index library for python
Papers that mentioned: 1
pypi: peyotl
Library for interacting with Open Tree of Life resources
Papers that mentioned: 2
pypi: web2py
full-stack framework for rapid development and prototyping of secure database-driven web-based applications, written and programmable in Python.
Papers that mentioned: 13