Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1093/bioinformatics/btaa093

https://doi.org/10.1093/bioinformatics/btaa093

Methplotlib: analysis of modified nucleotides from nanopore sequencing

Cited by: 22
Author(s): Wouter De Coster, Endre Bakken Stovner, Mojca Stražišar
Published: almost 5 years ago

Software Mentions 8

cran: plotly
Create Interactive Web Graphics via 'plotly.js'
Papers that mentioned: 163
cran: SAM
Sparse Additive Modelling
Papers that mentioned: 4,566
pypi: methplotlib
Plot methylation data obtained from nanopolish
Papers that mentioned: 2
pypi: numpy
Fundamental package for array computing in Python
Papers that mentioned: 832
pypi: plotly
An open-source, interactive data visualization library for Python
Papers that mentioned: 163
pypi: pyfaidx
pyfaidx: efficient pythonic random access to fasta subsequences
Papers that mentioned: 7
pypi: pyranges
GenomicRanges for Python.
Papers that mentioned: 2
pypi: scikit-learn
A set of python modules for machine learning and data mining
Papers that mentioned: 2,431