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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1093/bib/bbz155

https://doi.org/10.1093/bib/bbz155

Current challenges and best-practice protocols for microbiome analysis

Cited by: 219
Author(s): Richa Bharti, Dominik G. Grimm
Published: over 5 years ago

Software Mentions 4

cran: MED
Mediation by Tilted Balancing
Papers that mentioned: 188
Very Likely Science (83)
pypi: bowtie
Interactive Dashboard Toolkit.
Papers that mentioned: 1,566
Very Likely Science (90)
pypi: MetaPhlAn
MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.
Papers that mentioned: 306
Very Likely Science (100)
pypi: Sickle
A lightweight OAI client library for Python
Papers that mentioned: 740
Very Likely Science (100)