Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1093/bib/bbz096

https://doi.org/10.1093/bib/bbz096

Evaluation of single-cell classifiers for single-cell RNA sequencing data sets

Cited by: 54
Author(s): Xinlei Zhao, Shuang Wu, Nan Fang, Xiao Sun, Jue Fan
Published: about 5 years ago

Software Mentions 8

bioconductor: scmap
A tool for unsupervised projection of single cell RNA-seq data
Papers that mentioned: 34
bioconductor: SingleR
Reference-Based Single-Cell RNA-Seq Annotation
Papers that mentioned: 97
cran: caret
Classification and Regression Training
Papers that mentioned: 630
cran: randomForest
Breiman and Cutler's Random Forests for Classification and Regression
Papers that mentioned: 1,447
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
pypi: AltAnalyze
User Friendly Application for Comprehensive Transcriptome Analysis
Papers that mentioned: 102
pypi: caret
A Python Interface to Asterisk
Papers that mentioned: 630
pypi: scmap
Assigns rgb colors to points on sphere.
Papers that mentioned: 34