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Papers

Papers: 10.1080/19490976.2020.1752605

https://doi.org/10.1080/19490976.2020.1752605

Metagenomics reveals impact of geography and acute diarrheal disease on the Central Indian human gut microbiome

Cited by: 20
Author(s): Tanya Monaghan, Tim J. Sloan, Stephen R. Stockdale, Adam Blanchard, Richard D. Emes, Mark H. Wilcox, Rima Biswas, Rupam Nashine, Sonali Manke, Jinal Gandhi, Pratishtha Jain, Shrejal Bhotmange, Shrikant Ambalkar, Ashish Satav, Lorraine A. Draper, Colin Hill, Rajpal S. Kashyap
Published: over 6 years ago

Software Mentions 5

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
Very Likely Science (100)
cran: gtools
Various R Programming Tools
Papers that mentioned: 60
Very Likely Science (75)
cran: PERMANOVA
Multivariate Analysis of Variance Based on Distances and Permutations
Papers that mentioned: 6,292
Very Likely Science (85)
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903
Very Likely Science (100)
pypi: FishTaco
FishTaco: a metagenomic computational framework, aiming to identify the taxa that are driving functional shifts in microbiomes.
Papers that mentioned: 26
Very Likely Science (100)