Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/srep19233

https://doi.org/10.1038/srep19233

An evaluation of the accuracy and speed of metagenome analysis tools

Cited by: 273
Author(s): Stinus Lindgreen, Karen L. Adair, Paul P. Gardner
Published: almost 9 years ago

Software Mentions 3

cran: ART
Aligned Rank Transform for Nonparametric Factorial Analysis
Papers that mentioned: 580
pypi: MetaPhlAn
MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.
Papers that mentioned: 306
pypi: tk
TensorKit is a deep learning helper between Python and C++.
Papers that mentioned: 16