Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s41598-021-93878-2

https://doi.org/10.1038/s41598-021-93878-2

Benchmarking germline CNV calling tools from exome sequencing data

Cited by: 27
Author(s): Veronika Gordeeva, Е. И. Шарова, Konstantin Babalyan, Rinat Sultanov, Vadim M. Govorun, Georgij Arapidi
Published: over 3 years ago

Software Mentions 4

bioconductor: CODEX

A Normalization and Copy Number Variation Detection Method for Whole Exome Sequencing
Papers that mentioned: 72

bioconductor: exomeCopy

Copy number variant detection from exome sequencing read depth
Papers that mentioned: 7

cran: ExomeDepth

Calls Copy Number Variants from Targeted Sequence Data
Papers that mentioned: 112

pypi: CNVkit

Copy number variation toolkit for high-throughput sequencing.
Papers that mentioned: 161