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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1038/s41598-019-57214-z

https://doi.org/10.1038/s41598-019-57214-z

5-hydroxymethylcytosine and gene activity in mouse intestinal differentiation

Cited by: 14
Author(s): Santiago Uribe-Lewis, Thomas Carroll, Suraj Menon, Anna M. Nicholson, Piotr J. Manasterski, Douglas J. Winton, Simon Buczacki, Adele Murrell
Published: over 5 years ago

Software Mentions 6

bioconductor: ChIPQC
Quality metrics for ChIPseq data
Papers that mentioned: 15
Very Likely Science (90)
bioconductor: DEXSeq
Inference of differential exon usage in RNA-Seq
Papers that mentioned: 226
Very Likely Science (100)
bioconductor: DiffBind
Differential Binding Analysis of ChIP-Seq Peak Data
Papers that mentioned: 217
Very Likely Science (100)
bioconductor: GenomicRanges
Representation and manipulation of genomic intervals
Papers that mentioned: 323
Very Likely Science (90)
bioconductor: goseq
Gene Ontology analyser for RNA-seq and other length biased data
Papers that mentioned: 132
Very Likely Science (100)
bioconductor: Rsamtools
Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import
Papers that mentioned: 138
Very Likely Science (90)