Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s41598-018-25927-2

https://doi.org/10.1038/s41598-018-25927-2

Helicobacter pylori-infected C57BL/6 mice with different gastrointestinal microbiota have contrasting gastric pathology, microbial and host immune responses

Cited by: 24
Author(s): Zhongming Ge, Alexander Sheh, Yan Feng, Sureshkumar Muthupalani, Lili Ge, Chuanwu Wang, Susanna Kurnick, Anthony Mannion, Mark T. Whary, James G. Fox
Published: over 6 years ago

Software Mentions 6

bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: uclust
Clustering and Classification Inference with U-Statistics
Papers that mentioned: 454
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903
pypi: libraries
Papers that mentioned: 18
pypi: STAMP
A graphical software package for analyzing taxonomic and functional profiles.
Papers that mentioned: 1,190