Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1038/s41598-018-19655-w
https://doi.org/10.1038/s41598-018-19655-w
msgbsR: An R package for analysing methylation-sensitive restriction enzyme sequencing data
Cited by: 10
Author(s): Benjamin Mayne, Shalem Leemaqz, Sam Buckberry, Carlos M. Rodríguez López, Claire T. Roberts, Tina Bianco‐Miotto, James Breen
Published: over 6 years ago
Software Mentions 12
bioconductor: ChAMP
Chip Analysis Methylation Pipeline for Illumina HumanMethylation450 and EPICPapers that mentioned: 208
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in RPapers that mentioned: 6,568
bioconductor: methylSig
MethylSig: Differential Methylation Testing for WGBS and RRBS DataPapers that mentioned: 11
bioconductor: msgbsR
msgbsR: methylation sensitive genotyping by sequencing (MS-GBS) R functionsPapers that mentioned: 3
bioconductor: Rsamtools
Binary alignment (BAM), FASTA, variant call (BCF), and tabix file importPapers that mentioned: 138