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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1038/s41419-021-03740-6

https://doi.org/10.1038/s41419-021-03740-6

Single-cell analysis reveals urothelial cell heterogeneity and regenerative cues following cyclophosphamide-induced bladder injury

Cited by: 12
Author(s): Xiaomu Cheng, Huadong Lai, Wenqin Luo, Man Zhang, Juju Miao, Weichen Song, Shunpeng Xing, Jia Wang, Wei‐Qiang Gao
Published: about 4 years ago

Software Mentions 5

bioconductor: AUCell
AUCell: Analysis of 'gene set' activity in single-cell RNA-seq data (e.g. identify cells with specific gene signatures)
Papers that mentioned: 45
Very Likely Science (100)
bioconductor: clusterProfiler
A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223
Very Likely Science (75)
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
Very Likely Science (100)
pypi: CellPhoneDB
Inferring cell-cell communication.
Papers that mentioned: 89
Very Likely Science (100)
pypi: scvelo
RNA velocity generalized through dynamical modeling
Papers that mentioned: 9
Very Likely Science (100)