Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s41419-021-03552-8

https://doi.org/10.1038/s41419-021-03552-8

Transcriptional profiling reveals the transcription factor networks regulating the survival of striatal neurons

Cited by: 12
Author(s): Lin Yang, 智慧蘇, Zi-Wu Wang, Zhenmeiyu Li, Zicong Shang, Heng Du, Shuai Liu, Dashi Qi, Zhengang Yang, Zhejun Xu, Zhuangzhi Zhang
Published: almost 4 years ago

Software Mentions 8

bioconductor: clusterProfiler

A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223

bioconductor: DOSE

Disease Ontology Semantic and Enrichment analysis
Papers that mentioned: 138

bioconductor: edgeR

Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568

bioconductor: limma

Linear Models for Microarray Data
Papers that mentioned: 7,776

bioconductor: Mfuzz

Soft clustering of time series gene expression data
Papers that mentioned: 160

cran: pheatmap

Pretty Heatmaps
Papers that mentioned: 2,572

cran: WGCNA

Weighted Correlation Network Analysis
Papers that mentioned: 3,479

pypi: co

Python library for making and tracking mutated copies of DNA components
Papers that mentioned: 78