Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1016/j.patter.2021.100270

https://doi.org/10.1016/j.patter.2021.100270

ACSNI: An unsupervised machine-learning tool for prediction of tissue-specific pathway components using gene expression profiles

Cited by: 1
Author(s): Chinedu Anthony Anene, Faraz Khan, Findlay Bewicke-Copley, Eleni Maniati, Jun Wang
Published: over 3 years ago

Software Mentions 8

bioconductor: GSVA
Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893
pypi: ACSNI
automatic context-specific network inference
Papers that mentioned: 1
pypi: analysis
Source code analysis of Python programs
Papers that mentioned: 2,036
pypi: GSVA
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071
pypi: numpy
Fundamental package for array computing in Python
Papers that mentioned: 832
pypi: pandas
Powerful data structures for data analysis, time series, and statistics
Papers that mentioned: 640
pypi: sklearn
deprecated sklearn package, use scikit-learn instead
Papers that mentioned: 559